Surveys of soil and water reveal a goldmine of Phytophthora diversity in South African natural ecosystems.
Identifieur interne : 001217 ( Main/Exploration ); précédent : 001216; suivant : 001218Surveys of soil and water reveal a goldmine of Phytophthora diversity in South African natural ecosystems.
Auteurs : Eunsung Oh [Corée du Sud] ; Marieka Gryzenhout ; Brenda D. Wingfield ; Michael J. Wingfield ; Treena I. BurgessSource :
- IMA fungus [ 2210-6340 ] ; 2013.
Abstract
Phytophthora species are well-known as destructive plant pathogens, especially in natural ecosystems. It is ironic, therefore, how little is known regarding the Phytophthora diversity in South African natural woody ecosystems. In this study, Phytophthora species were isolated using standard baiting techniques from 182 soil and water samples and these were identified based on ITS and coxI sequence data. The 171 resulting Phytophthora isolates resided in 14 taxa including six known species (P. multivora, P. capensis, P. cryptogea, P. frigida, P. cinnamomi, P. cinnamomi var. parvispora), the known but as yet unnamed Phytophthora sp. PgChlamydo, P. sp. emzansi, and P. sp. Kununurra and five novel taxa referred to as P. sp. stellaris, P. sp. Umtamvuna P. sp. canthium, P. sp. xWS, P. sp. xHennops. Four of the new taxa were found exclusively in water and two of these are hybrids. The most commonly isolated species from soil was P. multivora, a species recently described from Western Australia. Phytophthora frigida was isolated for the first time from stream water. With the exception of P. cinnamomi, very little is known regarding the biology, epidemiology or origin of Phytophthora in South Africa.
DOI: 10.5598/imafungus.2013.04.01.12
PubMed: 23898418
PubMed Central: PMC3719200
Affiliations:
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Ltd. 345-9 Gasandong Gumcheongu, 153-802, Seoul, Republic of Korea.</nlm:affiliation><country xml:lang="fr">Corée du Sud</country><wicri:regionArea>Department of Genetics and Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa ; Current address: E-Planet Co. Ltd. 345-9 Gasandong Gumcheongu, 153-802, Seoul</wicri:regionArea><placeName><settlement type="city">Séoul</settlement><region type="capital">Région capitale de Séoul</region></placeName></affiliation></author><author><name sortKey="Gryzenhout, Marieka" sort="Gryzenhout, Marieka" uniqKey="Gryzenhout M" first="Marieka" last="Gryzenhout">Marieka Gryzenhout</name></author><author><name sortKey="Wingfield, Brenda D" sort="Wingfield, Brenda D" uniqKey="Wingfield B" first="Brenda D" last="Wingfield">Brenda D. Wingfield</name></author><author><name sortKey="Wingfield, Michael J" sort="Wingfield, Michael J" uniqKey="Wingfield M" first="Michael J" last="Wingfield">Michael J. Wingfield</name></author><author><name sortKey="Burgess, Treena I" sort="Burgess, Treena I" uniqKey="Burgess T" first="Treena I" last="Burgess">Treena I. Burgess</name></author></analytic><series><title level="j">IMA fungus</title><idno type="ISSN">2210-6340</idno><imprint><date when="2013" type="published">2013</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Phytophthora species are well-known as destructive plant pathogens, especially in natural ecosystems. It is ironic, therefore, how little is known regarding the Phytophthora diversity in South African natural woody ecosystems. In this study, Phytophthora species were isolated using standard baiting techniques from 182 soil and water samples and these were identified based on ITS and coxI sequence data. The 171 resulting Phytophthora isolates resided in 14 taxa including six known species (P. multivora, P. capensis, P. cryptogea, P. frigida, P. cinnamomi, P. cinnamomi var. parvispora), the known but as yet unnamed Phytophthora sp. PgChlamydo, P. sp. emzansi, and P. sp. Kununurra and five novel taxa referred to as P. sp. stellaris, P. sp. Umtamvuna P. sp. canthium, P. sp. xWS, P. sp. xHennops. Four of the new taxa were found exclusively in water and two of these are hybrids. The most commonly isolated species from soil was P. multivora, a species recently described from Western Australia. Phytophthora frigida was isolated for the first time from stream water. With the exception of P. cinnamomi, very little is known regarding the biology, epidemiology or origin of Phytophthora in South Africa. </div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">23898418</PMID><DateCompleted><Year>2013</Year><Month>07</Month><Day>30</Day></DateCompleted><DateRevised><Year>2020</Year><Month>09</Month><Day>28</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">2210-6340</ISSN><JournalIssue CitedMedium="Print"><Volume>4</Volume><Issue>1</Issue><PubDate><Year>2013</Year><Month>Jul</Month></PubDate></JournalIssue><Title>IMA fungus</Title><ISOAbbreviation>IMA Fungus</ISOAbbreviation></Journal><ArticleTitle>Surveys of soil and water reveal a goldmine of Phytophthora diversity in South African natural ecosystems.</ArticleTitle><Pagination><MedlinePgn>123-31</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.5598/imafungus.2013.04.01.12</ELocationID><Abstract><AbstractText>Phytophthora species are well-known as destructive plant pathogens, especially in natural ecosystems. It is ironic, therefore, how little is known regarding the Phytophthora diversity in South African natural woody ecosystems. In this study, Phytophthora species were isolated using standard baiting techniques from 182 soil and water samples and these were identified based on ITS and coxI sequence data. The 171 resulting Phytophthora isolates resided in 14 taxa including six known species (P. multivora, P. capensis, P. cryptogea, P. frigida, P. cinnamomi, P. cinnamomi var. parvispora), the known but as yet unnamed Phytophthora sp. PgChlamydo, P. sp. emzansi, and P. sp. Kununurra and five novel taxa referred to as P. sp. stellaris, P. sp. Umtamvuna P. sp. canthium, P. sp. xWS, P. sp. xHennops. Four of the new taxa were found exclusively in water and two of these are hybrids. The most commonly isolated species from soil was P. multivora, a species recently described from Western Australia. Phytophthora frigida was isolated for the first time from stream water. 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Burgess</name><name sortKey="Gryzenhout, Marieka" sort="Gryzenhout, Marieka" uniqKey="Gryzenhout M" first="Marieka" last="Gryzenhout">Marieka Gryzenhout</name><name sortKey="Wingfield, Brenda D" sort="Wingfield, Brenda D" uniqKey="Wingfield B" first="Brenda D" last="Wingfield">Brenda D. Wingfield</name><name sortKey="Wingfield, Michael J" sort="Wingfield, Michael J" uniqKey="Wingfield M" first="Michael J" last="Wingfield">Michael J. Wingfield</name></noCountry><country name="Corée du Sud"><region name="Région capitale de Séoul"><name sortKey="Oh, Eunsung" sort="Oh, Eunsung" uniqKey="Oh E" first="Eunsung" last="Oh">Eunsung Oh</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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